STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW56249.1Hypothetical protein; Manually curated. (136 aa)    
Predicted Functional Partners:
SCW56218.1
Type I secretion system ABC transporter, PrtD family.
       0.773
SCW56233.1
HlyD family secretion protein.
       0.773
SCW56266.1
AAA domain-containing protein.
     
 0.634
SCW56202.1
Hypothetical protein.
       0.488
SCW56279.1
Hypothetical protein.
       0.485
SCW56294.1
Hypothetical protein.
       0.485
SCW56309.1
Hypothetical protein.
       0.485
SCW56325.1
Phage terminase, large subunit GpA.
  
    0.485
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.