STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW59306.1Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family. (179 aa)    
Predicted Functional Partners:
SCW59292.1
Protein-tyrosine-phosphatase; Manually curated; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     0.974
hisD-3
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.785
SCW37858.1
Hypothetical protein.
  
     0.708
SCW78487.1
Uncharacterized conserved protein, DUF983 family.
 
     0.668
SCW85438.1
Thiamine-phosphate pyrophosphorylase.
  
     0.644
yacG
Hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.
 
     0.641
SCW46846.1
Cytochrome b pre-mRNA-processing protein 3.
  
     0.634
SCW59281.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.583
SCW89492.1
Protein of unknown function.
  
     0.575
SCW92058.1
Hypothetical protein.
  
     0.573
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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