STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW59434.1Probable non-F420 flavinoid oxidoreductase. (331 aa)    
Predicted Functional Partners:
SCW93834.1
Amino acid adenylation domain-containing protein.
   
 0.926
SCW59423.1
Alpha-glucosidase.
 
     0.750
SCW93796.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
   
 0.637
SCW95074.1
Propane monooxygenase reductase subunit.
  
 
 0.626
SCW55013.1
LPPG:FO 2-phospho-L-lactate transferase.
 
     0.625
SCW55028.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
     0.593
SCW54634.1
Alkanesulfonate monooxygenase.
  
     0.548
SCW80692.1
Rhodanese-related sulfurtransferase.
   
 
  0.536
fbiD
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
   
 0.497
SCW59408.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
  
     0.493
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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