STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW60002.1Putative phosphoesterase. (240 aa)    
Predicted Functional Partners:
SCW60023.1
ATP dependent helicase, Lhr family.
    0.980
SCW60100.1
DNA ligase-1.
 
   
 0.876
SCW60085.1
Putative mRNA 3-end processing factor.
 
     0.856
SCW70593.1
Hypothetical protein.
  
     0.659
SCW60055.1
Hypothetical protein.
       0.570
SCW60042.1
Hypothetical protein.
       0.568
SCW60070.1
Predicted methyltransferase, contains TPR repeat.
       0.459
SCW96281.1
Hypothetical protein.
  
     0.404
SCW29571.1
Deoxyribodipyrimidine photolyase-related protein.
  
     0.401
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.