STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW62452.1Hpr(Ser) kinase/phosphatase. (158 aa)    
Predicted Functional Partners:
SCW62472.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
     0.909
SCW62492.1
Two component transcriptional regulator, winged helix family.
 
     0.795
SCW62434.1
PTS system, mannose-specific IIA component.
 
   
 0.683
SCW62413.1
Phosphocarrier protein.
     
 0.678
SCW46825.1
Uncharacterized ACR, COG1399.
  
     0.568
SCW62511.1
Hypothetical protein.
       0.558
SCW32969.1
DNA-binding transcriptional regulator, MarR family.
  
 
   0.528
SCW85165.1
Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain.
  
     0.496
SCW62528.1
Phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.
     
 0.434
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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