STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW62664.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (423 aa)    
Predicted Functional Partners:
macB
Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.968
macB-2
Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.968
SCW62649.1
Hydrophobic/amphiphilic exporter-1, HAE1 family.
  0.930
SCW36522.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
 
  0.862
SCW53220.1
Multidrug efflux pump.
 
  0.861
SCW54212.1
Multidrug efflux pump.
 
  0.859
SCW93852.1
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.833
SCW77505.1
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.810
SCW74051.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.783
SCW93841.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.742
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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