Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW32232.1 | SCW32251.1 | SAMN05660859_0588 | SAMN05660859_0589 | Hypothetical protein. | N-terminal double-transmembrane domain-containing protein. | 0.920 |
SCW32232.1 | SCW32267.1 | SAMN05660859_0588 | SAMN05660859_0590 | Hypothetical protein. | Protein of unknown function DUF58. | 0.917 |
SCW32232.1 | SCW32930.1 | SAMN05660859_0588 | SAMN05660859_0624 | Hypothetical protein. | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | 0.447 |
SCW32232.1 | SCW72157.1 | SAMN05660859_0588 | SAMN05660859_2463 | Hypothetical protein. | Transcriptional regulator, XRE family. | 0.669 |
SCW32251.1 | SCW32232.1 | SAMN05660859_0589 | SAMN05660859_0588 | N-terminal double-transmembrane domain-containing protein. | Hypothetical protein. | 0.920 |
SCW32251.1 | SCW32267.1 | SAMN05660859_0589 | SAMN05660859_0590 | N-terminal double-transmembrane domain-containing protein. | Protein of unknown function DUF58. | 0.953 |
SCW32251.1 | SCW32930.1 | SAMN05660859_0589 | SAMN05660859_0624 | N-terminal double-transmembrane domain-containing protein. | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | 0.492 |
SCW32251.1 | SCW46872.1 | SAMN05660859_0589 | SAMN05660859_1365 | N-terminal double-transmembrane domain-containing protein. | Beta-barrel assembly machine subunit BamE. | 0.462 |
SCW32251.1 | SCW72157.1 | SAMN05660859_0589 | SAMN05660859_2463 | N-terminal double-transmembrane domain-containing protein. | Transcriptional regulator, XRE family. | 0.681 |
SCW32267.1 | SCW32232.1 | SAMN05660859_0590 | SAMN05660859_0588 | Protein of unknown function DUF58. | Hypothetical protein. | 0.917 |
SCW32267.1 | SCW32251.1 | SAMN05660859_0590 | SAMN05660859_0589 | Protein of unknown function DUF58. | N-terminal double-transmembrane domain-containing protein. | 0.953 |
SCW32267.1 | SCW32930.1 | SAMN05660859_0590 | SAMN05660859_0624 | Protein of unknown function DUF58. | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | 0.411 |
SCW32267.1 | SCW72157.1 | SAMN05660859_0590 | SAMN05660859_2463 | Protein of unknown function DUF58. | Transcriptional regulator, XRE family. | 0.623 |
SCW32930.1 | SCW32232.1 | SAMN05660859_0624 | SAMN05660859_0588 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | Hypothetical protein. | 0.447 |
SCW32930.1 | SCW32251.1 | SAMN05660859_0624 | SAMN05660859_0589 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | N-terminal double-transmembrane domain-containing protein. | 0.492 |
SCW32930.1 | SCW32267.1 | SAMN05660859_0624 | SAMN05660859_0590 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | Protein of unknown function DUF58. | 0.411 |
SCW32930.1 | SCW46872.1 | SAMN05660859_0624 | SAMN05660859_1365 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | Beta-barrel assembly machine subunit BamE. | 0.579 |
SCW32930.1 | SCW71645.1 | SAMN05660859_0624 | SAMN05660859_2427 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | HAD-superfamily class IIA hydrolase, TIGR01459. | 0.565 |
SCW32930.1 | SCW72157.1 | SAMN05660859_0624 | SAMN05660859_2463 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | Transcriptional regulator, XRE family. | 0.735 |
SCW32930.1 | recO | SAMN05660859_0624 | SAMN05660859_1386 | Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.431 |
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