STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW72157.1Transcriptional regulator, XRE family. (136 aa)    
Predicted Functional Partners:
SCW32930.1
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ.
  
     0.735
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.723
SCW46872.1
Beta-barrel assembly machine subunit BamE.
  
     0.714
SCW32251.1
N-terminal double-transmembrane domain-containing protein.
  
     0.681
SCW32232.1
Hypothetical protein.
  
     0.669
SCW72144.1
Methionine adenosyltransferase; Belongs to the AdoMet synthase family.
 
  
  0.654
SCW85342.1
Hypothetical protein.
  
     0.651
SCW71645.1
HAD-superfamily class IIA hydrolase, TIGR01459.
  
     0.636
SCW32267.1
Protein of unknown function DUF58.
  
     0.623
SCW73209.1
DNA polymerase III, delta subunit.
  
     0.604
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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