STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW72465.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
SCW36542.1
Apolipoprotein A1/A4/E domain-containing protein.
  
     0.765
SCW86369.1
Hypothetical protein.
  
     0.761
SCW30420.1
Hypothetical protein.
  
     0.759
SCW85513.1
Protein of unknown function.
  
     0.739
SCW71534.1
Hypothetical protein.
  
     0.737
SCW32727.1
Hypothetical protein.
  
     0.723
SCW46103.1
Invasion protein IalB, involved in pathogenesis.
  
     0.721
SCW47128.1
Hypothetical protein.
  
     0.713
SCW87967.1
Hypothetical protein.
  
     0.702
SCW96642.1
Uncharacterized conserved protein, DUF2336 family.
  
     0.678
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.