STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW72704.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SCW60116.1
Hypothetical protein.
  
     0.771
SCW96643.1
Hypothetical protein.
  
     0.767
SCW85119.1
Uncharacterized membrane protein.
  
     0.754
SCW30560.1
Flagellar export protein FliJ.
  
     0.752
SCW39607.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.749
SCW86369.1
Hypothetical protein.
  
     0.746
SCW73225.1
LPS-assembly lipoprotein.
  
     0.745
SCW46103.1
Invasion protein IalB, involved in pathogenesis.
  
     0.743
SCW72028.1
Predicted protein tyrosine phosphatase.
  
     0.736
SCW47128.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.