STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW72749.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-). (401 aa)    
Predicted Functional Partners:
SCW68612.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-)/amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.879
SCW67895.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.871
SCW58086.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.870
SCW38131.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.769
SCW66681.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.769
SCW38149.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.695
SCW47186.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.695
SCW66694.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.695
SCW54518.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.645
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
   0.589
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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