STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW73510.1Thiol:disulfide interchange protein DsbD. (617 aa)    
Predicted Functional Partners:
SCW73499.1
Protein-disulfide isomerase.
 
 
 0.976
SCW89709.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.953
SCW87424.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
  
 
 0.947
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.933
msrB
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
    
 
 0.933
SCW94083.1
Protein-disulfide isomerase.
 
 
 0.924
SCW92405.1
Protein-disulfide isomerase.
  
 
 0.905
SCW73536.1
Two-component system, OmpR family, sensor histidine kinase QseC.
 
    0.900
SCW73489.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
 
     0.717
SCW73524.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
     0.659
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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