STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW73701.1Putative tricarboxylic transport membrane protein. (159 aa)    
Predicted Functional Partners:
SCW73717.1
Putative tricarboxylic transport membrane protein.
 
  
 0.945
SCW73688.1
Putative tricarboxylic transport membrane protein.
 
 
 0.941
SCW73741.1
Two-component system, OmpR family, sensor histidine kinase TctE.
 
   
 0.809
SCW73756.1
iron(III) transport system substrate-binding protein.
 
     0.805
SCW59705.1
Hypothetical protein.
 
    0.658
SCW80641.1
Hypothetical protein.
 
    0.604
SCW80654.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
  
 0.536
SCW73730.1
Two-component system, OmpR family, response regulator TctD.
 
     0.482
SCW36262.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.477
SCW59611.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
 0.477
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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