STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW73903.1FecR family protein. (309 aa)    
Predicted Functional Partners:
SCW73890.1
RNA polymerase sigma-70 factor, ECF subfamily.
  0.930
SCW73915.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
    0.853
SCW59369.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
  0.835
SCW94213.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
  0.832
SCW73655.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
  0.831
SCW55418.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
  0.821
SCW94203.1
Iron complex outermembrane recepter protein.
 
  
 0.816
SCW59380.1
FecR family protein.
  
  
 
0.793
SCW59394.1
Hemoglobin/transferrin/lactoferrin receptor protein.
  
    0.714
SCW68331.1
Iron complex outermembrane recepter protein.
 
    0.675
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.