STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW74099.1Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. (328 aa)    
Predicted Functional Partners:
SCW74089.1
Arylsulfatase A.
 
   0.994
SCW68670.1
Choline-sulfatase.
 
   0.945
SCW93834.1
Amino acid adenylation domain-containing protein.
  
  
 0.766
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.643
SCW34189.1
Serine/threonine protein kinase.
  
 
 0.551
SCW36919.1
Hypothetical protein.
  
 
 0.551
SCW86369.1
Hypothetical protein.
  
 
 0.551
SCW66602.1
Caspase domain-containing protein; Manually curated.
     0.517
SCW56890.1
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
  
  
 0.498
SCW67717.1
HEAT repeat-containing protein.
   
 
  0.441
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.