STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW74389.1Protein of unknown function DUF58; Manually curated. (279 aa)    
Predicted Functional Partners:
SCW74327.1
Oxygen tolerance.
 
  
 0.970
SCW74352.1
Ca-activated chloride channel family protein.
 
    0.965
SCW74364.1
Ca-activated chloride channel family protein.
 
  
 0.957
SCW74402.1
MoxR-like ATPase.
 
  
 0.943
SCW74340.1
Ca-activated chloride channel family protein.
  
    0.804
SCW74376.1
Hypothetical protein.
       0.795
SCW42668.1
MoxR-like ATPase.
 
  
 0.582
SCW42691.1
Protein of unknown function DUF58.
  
     0.568
SCW32287.1
MoxR-like ATPase.
 
  
 0.564
SCW74414.1
Signal transduction histidine kinase.
       0.523
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.