STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW78553.1Bacterioferritin-associated ferredoxin. (159 aa)    
Predicted Functional Partners:
SCW78567.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.976
SCW87989.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.918
SCW92710.1
Putative iron-regulated protein.
  
  
 0.670
SCW57647.1
NAD(P)H-dependent nitrite reductase flavoprotein subunit.
  
  
 0.611
SCW52779.1
N-methylglutamate dehydrogenase subunit C.
    
  0.582
SCW86161.1
Sarcosine oxidase subunit alpha.
    
  0.582
SCW72640.1
Formate dehydrogenase alpha subunit.
    
  0.512
SCW80390.1
Protein TonB.
  
  
 0.475
SCW85848.1
Cell division and transport-associated protein TolA.
  
  
 0.475
SCW93834.1
Amino acid adenylation domain-containing protein.
      
 0.473
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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