STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW78577.1iron(III) transport system substrate-binding protein. (349 aa)    
Predicted Functional Partners:
SCW78591.1
iron(III) transport system permease protein.
 
 
 0.992
SCW40569.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.953
SCW92710.1
Putative iron-regulated protein.
  
    0.897
SCW54025.1
iron(III) transport system permease protein.
 
 
 0.834
SCW67452.1
iron(III) transport system permease protein.
  
 
 0.782
SCW54058.1
iron(III) transport system substrate-binding protein.
  
  
 0.779
SCW73756.1
iron(III) transport system substrate-binding protein.
  
  
  0.769
SCW62511.1
Hypothetical protein.
   
    0.755
SCW54045.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.688
SCW85566.1
Chemotaxis protein MotB.
    
   0.618
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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