STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW78915.1Putative hydroxymethylpyrimidine transport system permease protein. (250 aa)    
Predicted Functional Partners:
SCW78889.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
 
  0.997
SCW78104.1
NitT/TauT family transport system permease protein.
  
  
  0.814
SCW68515.1
NitT/TauT family transport system ATP-binding protein.
 
  0.785
SCW78904.1
Hypothetical protein.
       0.773
tauB
Taurine transport system ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
 
  0.764
SCW29521.1
Taurine transport system substrate-binding protein.
 
 
 0.705
SCW86704.1
NitT/TauT family transport system ATP-binding protein.
 
  0.695
SCW89192.1
NitT/TauT family transport system ATP-binding protein.
 
  0.681
SCW91913.1
NitT/TauT family transport system permease protein.
 
  
  0.671
SCW69938.1
NitT/TauT family transport system ATP-binding protein.
 
  0.646
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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