STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW79003.1Conserved hypothetical protein. (257 aa)    
Predicted Functional Partners:
SCW79015.1
Hypothetical protein.
 
     0.950
SCW72273.1
Universal stress protein family protein.
 
     0.803
SCW60927.1
Nitrogen fixation protein FixH.
  
     0.651
SCW85165.1
Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain.
  
     0.634
SCW94101.1
Hypothetical protein.
  
     0.621
SCW32832.1
BMFP domain-containing protein YqiC.
  
     0.547
SCW46846.1
Cytochrome b pre-mRNA-processing protein 3.
  
     0.545
SCW81755.1
Aspartyl protease family protein.
  
     0.536
SCW37858.1
Hypothetical protein.
  
     0.481
SCW78927.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.459
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.