STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW79548.1Large terminase phage packaging protein. (440 aa)    
Predicted Functional Partners:
SCW79560.1
Phage portal protein, HK97 family.
     0.949
SCW79792.1
Putative phage tail protein.
     0.840
SCW79725.1
Phage tail tube protein, GTA-gp10.
 
    0.827
SCW79746.1
Hypothetical protein.
 
    0.809
SCW79716.1
Phage major tail protein, TP901-1 family.
 
     0.803
SCW79757.1
TIGR02217 family protein.
 
     0.802
SCW79768.1
Phage conserved hypothetical protein BR0599.
 
     0.802
SCW79779.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.802
SCW79534.1
Hypothetical protein.
       0.800
SCW79682.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
    0.799
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.