Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW47024.1 | SCW80509.1 | SAMN05660859_1372 | SAMN05660859_2954 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.455 |
SCW80492.1 | SCW80501.1 | SAMN05660859_2952 | SAMN05660859_2953 | Isocitrate lyase. | Hypothetical protein. | 0.469 |
SCW80492.1 | SCW80509.1 | SAMN05660859_2952 | SAMN05660859_2954 | Isocitrate lyase. | Hypothetical protein. | 0.823 |
SCW80492.1 | glcB | SAMN05660859_2952 | SAMN05660859_2951 | Isocitrate lyase. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.997 |
SCW80501.1 | SCW80492.1 | SAMN05660859_2953 | SAMN05660859_2952 | Hypothetical protein. | Isocitrate lyase. | 0.469 |
SCW80501.1 | SCW80509.1 | SAMN05660859_2953 | SAMN05660859_2954 | Hypothetical protein. | Hypothetical protein. | 0.527 |
SCW80509.1 | SCW47024.1 | SAMN05660859_2954 | SAMN05660859_1372 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.455 |
SCW80509.1 | SCW80492.1 | SAMN05660859_2954 | SAMN05660859_2952 | Hypothetical protein. | Isocitrate lyase. | 0.823 |
SCW80509.1 | SCW80501.1 | SAMN05660859_2954 | SAMN05660859_2953 | Hypothetical protein. | Hypothetical protein. | 0.527 |
SCW80509.1 | glcB | SAMN05660859_2954 | SAMN05660859_2951 | Hypothetical protein. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.589 |
glcB | SCW80492.1 | SAMN05660859_2951 | SAMN05660859_2952 | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | Isocitrate lyase. | 0.997 |
glcB | SCW80509.1 | SAMN05660859_2951 | SAMN05660859_2954 | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | Hypothetical protein. | 0.589 |