STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW80946.1Protein of unknwon function. (61 aa)    
Predicted Functional Partners:
SCW60329.1
Uncharacterized membrane protein YtjA, UPF0391 family.
 
    0.882
SCW35087.1
Protein of unknown function.
  
    0.734
SCW47431.1
Hypothetical protein.
   
    0.713
SCW61775.1
Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family.
   
    0.713
SCW80926.1
Ferritin-like metal-binding protein YciE.
 
     0.649
SCW80959.1
Low affinity Fe/Cu permease.
 
     0.632
SCW46734.1
DNA-binding transcriptional regulator, MerR family.
   
    0.508
SCW86242.1
Hypothetical protein.
   
    0.454
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.