STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW81672.1Putative spermidine/putrescine transport system permease protein. (290 aa)    
Predicted Functional Partners:
SCW81686.1
Putative spermidine/putrescine transport system permease protein.
 
  0.992
SCW95096.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.977
SCW67600.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.966
SCW93378.1
Putative spermidine/putrescine transport system permease protein.
 
  
  0.962
SCW43353.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.960
SCW29379.1
Spermidine/putrescine transport system permease protein.
 
 
  0.921
SCW57027.1
Putrescine transport system permease protein.
 
 
  0.915
SCW55615.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.913
SCW53476.1
Putative spermidine/putrescine transport system permease protein.
 
 
 
0.911
SCW81660.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
  0.887
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.