STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW85075.1Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family. (94 aa)    
Predicted Functional Partners:
SCW85240.1
Hypothetical protein.
  
   
 0.790
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.761
SCW85342.1
Hypothetical protein.
  
   
 0.755
SCW92212.1
DNA polymerase III, chi subunit.
  
     0.741
SCW57847.1
ATP-dependent helicase/nuclease subunit B.
  
     0.729
SCW70312.1
Glutathione S-transferase.
  
     0.701
SCW57829.1
DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily.
  
     0.687
SCW58749.1
SH3-like domain-containing protein.
  
     0.674
atpF
F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.665
SCW86219.1
SH3-like domain-containing protein.
  
     0.644
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.