STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW85954.1Glycine betaine/proline transport system substrate-binding protein. (317 aa)    
Predicted Functional Partners:
SCW85929.1
Glycine betaine/proline transport system ATP-binding protein.
 
 0.998
SCW85942.1
Glycine betaine/proline transport system permease protein.
 
 0.998
SCW37994.1
Glycine betaine/proline transport system permease protein.
 
 0.995
SCW38009.1
Glycine betaine/proline transport system ATP-binding protein.
 
 0.990
SCW37976.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
 
0.500
betI
Transcriptional regulator, TetR family; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid. Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine.
 
     0.475
SCW85975.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
     0.428
SCW85992.1
Electron transfer flavoprotein beta subunit.
  
    0.425
SCW86076.1
Ferredoxin-NADP reductase.
  
  
 0.425
SCW59468.1
Osmoprotectant transport system substrate-binding protein.
   
 
 0.416
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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