STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW90058.1Gamma-glutamyl-gamma-aminobutyrate hydrolase. (267 aa)    
Predicted Functional Partners:
SCW87989.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.908
SCW56968.1
Glutamine synthetase.
 
 
 0.802
SCW82430.1
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
 
 
 0.726
SCW57064.1
Gamma-glutamylputrescine oxidase.
 
  
 0.692
SCW82417.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
  0.650
SCW81648.1
Glycine/D-amino acid oxidase.
 
  
 0.645
SCW67093.1
Glycine/D-amino acid oxidase.
 
  
 0.600
SCW93370.1
Glycine/D-amino acid oxidase.
 
  
 0.541
SCW37054.1
Glutamine synthetase.
  
 
 0.530
SCW52901.1
Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family.
  
 
 0.530
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.