STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW90106.1Ammonium transporter, Amt family. (454 aa)    
Predicted Functional Partners:
SCW37072.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SCW90098.1
Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family.
 0.999
SCW91704.1
PAS domain S-box-containing protein.
  
 
 0.872
SCW87989.1
Glutamate synthase (NADPH/NADH) large chain.
 
  
 0.830
SCW42244.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 
 
 0.793
SCW85420.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.706
SCW68434.1
Signal transduction histidine kinase.
 
  
 0.673
SCW33653.1
Signal transduction histidine kinase.
 
  
 0.664
ureB
Urease subunit gamma/beta; Belongs to the urease beta subunit family.
  
  
 0.664
glnD
UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
 
   
 0.628
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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