STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW90163.1TIGR02302 family protein. (895 aa)    
Predicted Functional Partners:
SCW32232.1
Hypothetical protein.
  
     0.775
SCW32251.1
N-terminal double-transmembrane domain-containing protein.
  
    0.775
SCW32267.1
Protein of unknown function DUF58.
  
     0.774
SCW96224.1
Protein of unknown function.
  
     0.746
SCW85272.1
Hypothetical protein.
  
     0.735
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.728
SCW71222.1
Putative signal transducing protein.
 
     0.648
SCW70705.1
TIGR02300 family protein.
  
     0.630
SCW87170.1
HemY protein.
  
    0.619
SCW72094.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
     0.590
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.