STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW90270.1DNA-binding transcriptional regulator, GntR family. (242 aa)    
Predicted Functional Partners:
SCW90066.1
Transcriptional regulator, GntR family.
  
     0.704
SCW67496.1
DNA-binding transcriptional regulator, FadR family.
  
    0.602
SCW79445.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
    0.589
SCW78059.1
DNA-binding transcriptional regulator, FadR family.
  
    0.495
SCW90256.1
Tripartite tricarboxylate transporter TctB family protein.
 
     0.427
SCW86475.1
MFS transporter, OFA family, oxalate/formate antiporter.
  
     0.421
SCW90277.1
Uncharacterized conserved protein, tellurite resistance protein B (TerB) family.
       0.420
SCW86483.1
MFS transporter, OFA family, oxalate/formate antiporter.
  
     0.406
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.