STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW90689.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
SCW90682.1
Hypothetical protein.
 
     0.953
SCW82612.1
Hypothetical protein; Partial gene; manually curated.
  
     0.583
SCW29937.1
Hypothetical protein.
  
     0.575
SCW36030.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
  
     0.527
SCW29905.1
Hypothetical protein.
  
     0.510
SCW30420.1
Hypothetical protein.
  
     0.510
SCW29919.1
Hypothetical protein.
  
     0.488
SCW60055.1
Hypothetical protein.
  
     0.480
SCW90696.1
Hypothetical protein.
       0.474
SCW43187.1
DNA repair exonuclease SbcCD ATPase subunit.
  
     0.473
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.