SCW91793.1 protein (Ancylobacter rudongensis)

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Score

SCW91793.1

Cold shock protein (beta-ribbon, CspA family). (70 aa)

Predicted Functional Partners:

rpoZ

0.725

rpoB

0.722

rpoA

0.710

SCW93834.1

0.507

rpsL

0.446

SCW91785.1

0.443

rpmE

0.430

rplO

0.407

rpmJ

0.405

Your Current Organism:

Ancylobacter rudongensis

NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SCW91785.1	SCW91793.1	SAMN05660859_3740	SAMN05660859_3741	Hypothetical protein.	Cold shock protein (beta-ribbon, CspA family).	0.443
SCW91793.1	SCW91785.1	SAMN05660859_3741	SAMN05660859_3740	Cold shock protein (beta-ribbon, CspA family).	Hypothetical protein.	0.443
SCW91793.1	SCW93834.1	SAMN05660859_3741	SAMN05660859_4023	Cold shock protein (beta-ribbon, CspA family).	Amino acid adenylation domain-containing protein.	0.507
SCW91793.1	rplO	SAMN05660859_3741	SAMN05660859_0239	Cold shock protein (beta-ribbon, CspA family).	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.407
SCW91793.1	rpmE	SAMN05660859_3741	SAMN05660859_3220	Cold shock protein (beta-ribbon, CspA family).	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.430
SCW91793.1	rpmJ	SAMN05660859_3741	SAMN05660859_3191	Cold shock protein (beta-ribbon, CspA family).	Large subunit ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.405
SCW91793.1	rpoA	SAMN05660859_3741	SAMN05660859_0233	Cold shock protein (beta-ribbon, CspA family).	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.710
SCW91793.1	rpoB	SAMN05660859_3741	SAMN05660859_0355	Cold shock protein (beta-ribbon, CspA family).	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.722
SCW91793.1	rpoZ	SAMN05660859_3741	SAMN05660859_1395	Cold shock protein (beta-ribbon, CspA family).	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.725
SCW91793.1	rpsL	SAMN05660859_3741	SAMN05660859_0357	Cold shock protein (beta-ribbon, CspA family).	SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.446
SCW93834.1	SCW91793.1	SAMN05660859_4023	SAMN05660859_3741	Amino acid adenylation domain-containing protein.	Cold shock protein (beta-ribbon, CspA family).	0.507
SCW93834.1	rplO	SAMN05660859_4023	SAMN05660859_0239	Amino acid adenylation domain-containing protein.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.978
SCW93834.1	rpmE	SAMN05660859_4023	SAMN05660859_3220	Amino acid adenylation domain-containing protein.	LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.702
SCW93834.1	rpmJ	SAMN05660859_4023	SAMN05660859_3191	Amino acid adenylation domain-containing protein.	Large subunit ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.830
SCW93834.1	rpoA	SAMN05660859_4023	SAMN05660859_0233	Amino acid adenylation domain-containing protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.694
SCW93834.1	rpoB	SAMN05660859_4023	SAMN05660859_0355	Amino acid adenylation domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.661
SCW93834.1	rpoZ	SAMN05660859_4023	SAMN05660859_1395	Amino acid adenylation domain-containing protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.611
SCW93834.1	rpsL	SAMN05660859_4023	SAMN05660859_0357	Amino acid adenylation domain-containing protein.	SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.800
rplO	SCW91793.1	SAMN05660859_0239	SAMN05660859_3741	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Cold shock protein (beta-ribbon, CspA family).	0.407
rplO	SCW93834.1	SAMN05660859_0239	SAMN05660859_4023	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Amino acid adenylation domain-containing protein.	0.978