STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW91889.1PQQ-dependent catabolism-associated beta-propeller protein. (328 aa)    
Predicted Functional Partners:
SCW91894.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
 
  
 0.939
SCW91881.1
Hypothetical protein.
 
    0.915
SCW91876.1
ABC-2 type transport system ATP-binding protein.
 
    0.884
SCW91871.1
ABC-2 type transport system permease protein.
 
   
 0.879
SCW91906.1
NitT/TauT family transport system substrate-binding protein.
 
    0.858
SCW87989.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.824
SCW91846.1
C-type cytochrome, methanol metabolism-related.
 
  0.824
SCW77951.1
C-type cytochrome, methanol metabolism-related.
 
  0.823
SCW91864.1
Hypothetical protein.
 
     0.822
SCW91913.1
NitT/TauT family transport system permease protein.
 
     0.818
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.