STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW92613.1Threonine/homoserine/homoserine lactone efflux protein. (211 aa)    
Predicted Functional Partners:
SCW92605.1
Transcription elongation factor, GreA/GreB family.
       0.773
SCW92621.1
Glycosyltransferases involved in cell wall biogenesis.
       0.601
SCW92598.1
Superfamily II DNA and RNA helicase; Belongs to the DEAD box helicase family.
  
    0.504
SCW67369.1
L-lysine exporter family protein LysE/ArgO.
      
 0.487
SCW60179.1
Glutamate or tyrosine decarboxylase.
  
     0.403
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.