Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW61824.1 | SCW73499.1 | SAMN05660859_2029 | SAMN05660859_2583 | Protein-disulfide isomerase. | Protein-disulfide isomerase. | 0.723 |
SCW61824.1 | SCW89709.1 | SAMN05660859_2029 | SAMN05660859_3530 | Protein-disulfide isomerase. | Thiol-disulfide isomerase or thioredoxin. | 0.454 |
SCW61824.1 | SCW92405.1 | SAMN05660859_2029 | SAMN05660859_3847 | Protein-disulfide isomerase. | Protein-disulfide isomerase. | 0.746 |
SCW61824.1 | SCW93963.1 | SAMN05660859_2029 | SAMN05660859_4043 | Protein-disulfide isomerase. | Thioredoxin-like. | 0.422 |
SCW61824.1 | SCW94083.1 | SAMN05660859_2029 | SAMN05660859_4063 | Protein-disulfide isomerase. | Protein-disulfide isomerase. | 0.733 |
SCW73499.1 | SCW61824.1 | SAMN05660859_2583 | SAMN05660859_2029 | Protein-disulfide isomerase. | Protein-disulfide isomerase. | 0.723 |
SCW73499.1 | SCW73536.1 | SAMN05660859_2583 | SAMN05660859_2586 | Protein-disulfide isomerase. | Two-component system, OmpR family, sensor histidine kinase QseC. | 0.693 |
SCW73499.1 | SCW87424.1 | SAMN05660859_2583 | SAMN05660859_3388 | Protein-disulfide isomerase. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.411 |
SCW73499.1 | SCW93963.1 | SAMN05660859_2583 | SAMN05660859_4043 | Protein-disulfide isomerase. | Thioredoxin-like. | 0.932 |
SCW73536.1 | SCW73499.1 | SAMN05660859_2586 | SAMN05660859_2583 | Two-component system, OmpR family, sensor histidine kinase QseC. | Protein-disulfide isomerase. | 0.693 |
SCW73536.1 | SCW93963.1 | SAMN05660859_2586 | SAMN05660859_4043 | Two-component system, OmpR family, sensor histidine kinase QseC. | Thioredoxin-like. | 0.786 |
SCW87424.1 | SCW73499.1 | SAMN05660859_3388 | SAMN05660859_2583 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Protein-disulfide isomerase. | 0.411 |
SCW87424.1 | SCW89709.1 | SAMN05660859_3388 | SAMN05660859_3530 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Thiol-disulfide isomerase or thioredoxin. | 0.610 |
SCW87424.1 | SCW92405.1 | SAMN05660859_3388 | SAMN05660859_3847 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Protein-disulfide isomerase. | 0.418 |
SCW87424.1 | SCW93963.1 | SAMN05660859_3388 | SAMN05660859_4043 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Thioredoxin-like. | 0.947 |
SCW87424.1 | SCW94083.1 | SAMN05660859_3388 | SAMN05660859_4063 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Protein-disulfide isomerase. | 0.417 |
SCW87424.1 | msrA | SAMN05660859_3388 | SAMN05660859_1981 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.990 |
SCW87424.1 | msrB | SAMN05660859_3388 | SAMN05660859_2846 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family. | 0.878 |
SCW89709.1 | SCW61824.1 | SAMN05660859_3530 | SAMN05660859_2029 | Thiol-disulfide isomerase or thioredoxin. | Protein-disulfide isomerase. | 0.454 |
SCW89709.1 | SCW87424.1 | SAMN05660859_3530 | SAMN05660859_3388 | Thiol-disulfide isomerase or thioredoxin. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.610 |
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