STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
SCW94040.1Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family. (180 aa)    
Predicted Functional Partners:
SCW94034.1
Hypothetical protein.
     0.994
SCW94048.1
Radical SAM protein, MSMEG_0568 family.
   
 0.979
SCW94053.1
Aliphatic nitrilase.
 
  
  0.955
SCW94024.1
MSMEG_0570 family protein.
 
     0.953
SCW94016.1
Putative flavoprotein involved in K+ transport.
 
     0.947
SCW94030.1
Glycosyltransferase, MSMEG_0565 family.
 
     0.945
SCW94060.1
MSMEG_0572 family protein.
 
   
 0.911
SCW94065.1
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain.
 
     0.786
SCW94008.1
Probable biosynthetic protein, Pnap_2097 family.
       0.777
ispDF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
    
  0.768
Your Current Organism:
Ancylobacter rudongensis
NCBI taxonomy Id: 177413
Other names: A. rudongensis, Ancylobacter rudongensis Xin et al. 2004, JCM 11671
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