node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplC | FTT_0141 | FTT_0325 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.998 |
rplA | rplJ | FTT_0141 | FTT_0142 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplA | rplK | FTT_0141 | FTT_0140 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplL | FTT_0141 | FTT_0143 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.999 |
rplA | rplS | FTT_0141 | FTT_0153 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
rplA | rpoB | FTT_0141 | FTT_0144 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.976 |
rplA | rpsB | FTT_0141 | FTT_0313 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Similar to RS2_SPIPL (P34831) 30S ribosomal protein S2 from Spirulina platensis (251 aa). FASTA: opt: 953 Z-score: 1141.6 E(): 1.1e-55 Smith-Waterman score: 953; 61.364 identity in 220 aa overlap; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
rplA | rpsL | FTT_0141 | FTT_0321 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.997 |
rplA | rpsP | FTT_0141 | FTT_0150 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Similar to AAP96669 (Q7VKG0) 30S ribosomal protein S16 from Haemophilus ducreyi (82 aa). FASTA: opt: 423 Z-score: 598.5 E(): 1.9e-25 Smith-Waterman score: 423; 75.610 identity in 82 aa overlap; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplA | tufA | FTT_0141 | FTT_0137 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.996 |
rplC | rplA | FTT_0325 | FTT_0141 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.998 |
rplC | rplJ | FTT_0325 | FTT_0142 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplC | rplK | FTT_0325 | FTT_0140 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplC | rplL | FTT_0325 | FTT_0143 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.997 |
rplC | rplS | FTT_0325 | FTT_0153 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
rplC | rpoB | FTT_0325 | FTT_0144 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
rplC | rpsB | FTT_0325 | FTT_0313 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Similar to RS2_SPIPL (P34831) 30S ribosomal protein S2 from Spirulina platensis (251 aa). FASTA: opt: 953 Z-score: 1141.6 E(): 1.1e-55 Smith-Waterman score: 953; 61.364 identity in 220 aa overlap; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplC | rpsL | FTT_0325 | FTT_0321 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.998 |
rplC | rpsP | FTT_0325 | FTT_0150 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Similar to AAP96669 (Q7VKG0) 30S ribosomal protein S16 from Haemophilus ducreyi (82 aa). FASTA: opt: 423 Z-score: 598.5 E(): 1.9e-25 Smith-Waterman score: 423; 75.610 identity in 82 aa overlap; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplC | tufA | FTT_0325 | FTT_0137 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Elongation factor Tu (EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.997 |