STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FTT_1143Hypothetical protein; ORF ftt1143. (81 aa)    
Predicted Functional Partners:
FTT_0845
Similar to Q9F7P6 Predicted CsgA,Rossman fold oxidoreductase from Gamma-proteobacterium EBAC31A08 (262 aa). FASTA: opt: 764 Z-score: 936.3 E(): 2.9e-44 Smith-Waterman score: 764; 53.390identity in 236 aa overlap. Contains an in-frame stop codon after aa 59 ORF ftt0844.
      
 0.646
FTT_0784
Hypothetical protein; ORF ftt0784.
      
 0.629
FTT_1234
Similar to Q8YIA2 Choloylglycine hydrolase (EC 3.5.1.24) from Brucella melitensis (367 aa). FASTA: opt: 387 Z-score: 460.1 E(): 9.7e-18 Smith-Waterman score: 574; 34.718 identity in 337 aa overlap. ORF ftt1234.
      
 0.629
FTT_1414
Hypothetical protein; ORF ftt1414.
      
 0.629
ilvH
Similar to Q8A609 Acetolactate synthase large subunit from Bacteroides thetaiotaomicron (565 aa). FASTA: opt: 1850 Z-score: 2038.0 E(): 1.1e-105 Smith-Waterman score: 1850; 50.089 identity in 559 aa overlap. Contains a frameshift after aa 427.
      
 0.576
ddlB
D-alanine--D-alanine ligase B; Cell wall formation.
      
 0.557
Your Current Organism:
Francisella tularensis SCHUS4
NCBI taxonomy Id: 177416
Other names: F. tularensis subsp. tularensis SCHU S4, Francisella tularensis Biovar A str. SCHU S4, Francisella tularensis Biovar A str. Schu 4, Francisella tularensis subsp. tularensis SCHU S4, Francisella tularensis subsp. tularensis Schu 4, Francisella tularensis subsp. tularensis str. SCHU S4, Francisella tularensis subsp. tularensis strain SCHU S4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.