STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW16297.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)    
Predicted Functional Partners:
AOW18969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.911
AOW16296.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.811
AOW16295.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.792
AOW16299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.767
AOW16294.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
AOW16301.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.738
AOW16298.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.737
AOW19006.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.643
AOW16300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.604
AOW18277.1
DUF3575 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
Your Current Organism:
Polaribacter vadi
NCBI taxonomy Id: 1774273
Other names: JCM 31217, KACC 18704, P. vadi, Polaribacter sp. LPB0003, Polaribacter vadi Kim et al. 2017, strain LPB0003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.