STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rndBRndB; Predicted cation efflux system, transmembrane protein RndB (heavy metal, antibiotica resistance); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (506 aa)    
Predicted Functional Partners:
rndA
RndA; Cation efflux system family protein RndA (heavy metal, antibiotica resistance); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.992
ACN13171.1
Putative metal ion efflux outer membrane family protein.
 
 
 0.953
ACN13170.1
Putative metal ion efflux outer membrane family protein (TolC-like).
 
 
 0.947
ACN17365.1
Acriflavin resistance family protein (AcrB/AcrD/AcrF family protein); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.890
ACN13167.1
Conserved hypothetical protein.
  
    0.742
ACN17207.1
Peptidase M28B family protein.
 
 
 0.660
nolG
NolG; Nodulation protein precursor NolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.588
mdtC
MdtC; Multidrug resistance protein MdtC (cation/multidrug efflux pump MdtC); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.548
ACN13694.1
Outer membrane efflux protein.
 
 
 0.532
ACN13359.1
Cobalt-zinc-cadmium resistance protein CzcA-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.519
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.