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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13170.1Putative metal ion efflux outer membrane family protein (TolC-like). (518 aa)    
Predicted Functional Partners:
rndB
RndB; Predicted cation efflux system, transmembrane protein RndB (heavy metal, antibiotica resistance); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.947
rndA
RndA; Cation efflux system family protein RndA (heavy metal, antibiotica resistance); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.912
ACN13171.1
Putative metal ion efflux outer membrane family protein.
 
    
0.866
ACN15551.1
Putative adenylate cyclase family protein.
 
     0.747
ACN13167.1
Conserved hypothetical protein.
  
    0.662
ACN17207.1
Peptidase M28B family protein.
 
 
 0.614
ACN13954.1
Multidrug resistance protein (efflux pump/antiporter).
  
     0.597
ACN17760.1
Putative permease.
 
     0.584
tmcA2
TmcA2; Acidic type II cytochrome TmcA2 (TpII-c3).
  
   
 0.582
ACN16150.1
Transposase (IS4 element).
  
   
 0.558
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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