STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narJNarJ; Nitrate reductase, delta subunit. (188 aa)    
Predicted Functional Partners:
narG
NarG; Respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.999
narH
NarH; Nitrate reductase, beta subunit.
 
 
 0.998
narI
NarI; Nitrate reductase, gamma subunit.
 
  
 0.993
hmeC
HmeC; Hdr-like menaquinol-oxidizing complex, subunit HmeC.
  
  
 0.861
ACN13185.1
Predicted C4-dicarboxylate transporter/malic acid transport protein.
 
     0.843
oxlT
OxlT; Oxalate/formate antiporter OxlT.
  
  
 0.816
tmcC1
TmcC1; Membrane-bound heme containing protein TmcC1.
  
  
 0.743
tmcC2
TmcC2; Membrane-bound heme containing protein TmcC2.
  
  
 0.743
ACN15506.1
Iron-sulfur cluster-binding protein (Rieskeprotein, 2Fe-2S protein).
  
  
 0.718
ytfE
YtfE; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
     
 0.642
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.