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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13193.1ABC-type transporter, predicted ATP-binding protein. (236 aa)    
Predicted Functional Partners:
ACN13192.1
ABC-type transporter, predicted premease protein.
 
 
 0.979
hlyD
HlyD; Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.968
ACN14740.1
ABC-type transporter, permease component.
 
 0.967
ACN13697.1
Putative macrolipide-specific ABC-type efflux carrier (MacA conjunction protein).
 
 0.965
ACN13190.1
HTH-type transcriptional regulator (TetR-family protein).
 
 
 
 0.961
ACN13194.1
Proton-shuffling outer membrane efflux protein (OprM-like).
 
 
 
 0.882
ACN13519.1
Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.786
appF2
AppF2; Oligopeptide ABC-transporter, ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
    
0.657
dppF1
DppF1; ABC-type dipeptide/oligopeptide/nickel transport system, ATP binding component DppF; Belongs to the ABC transporter superfamily.
 
     
0.653
dppF2
DppF2; ABC-type dipeptide transport system, ATPase component DppF; Belongs to the ABC transporter superfamily.
 
 
   
0.649
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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