STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13215.1Putative outer membrane efflux protein (OprM-family protein). (483 aa)    
Predicted Functional Partners:
ACN13214.1
Putative H+-transporting two-sector ATPase, beta subunit (ArcA-family protein); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.930
ACN14691.1
RND efflux pump (AcrB/AcrD/AcrF family protein).
 
 0.890
acrB
AcrB; Cation/multidrug efflux pump, integral membrane protein AcrB (Acriflavin resistance family protein).
 
 0.870
ACN13213.1
Putative H+-transporting two-sector ATPase, gamma subunit (AcrC-family protein); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.842
ACN13360.1
Putative membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.809
arcA
ArcA; Cation/multidrug efflux pump, periplasmic resistance protein AcrA (Acriflavine resistance protein A precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.744
ACN13216.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
       0.709
ACN13217.1
Conserved hypothetical protein (non-secretory protein with 6 TMhelices).
       0.709
fdx1
Fdx1; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx1.
       0.709
ACN14690.1
RND efflux transporter (HlyD family secretion protein); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.706
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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