STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13216.1FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein). (586 aa)    
Predicted Functional Partners:
fdx1
Fdx1; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx1.
 
 
 0.972
sdhB
SdhB; Succinate dehydrogenase/fumarate reductase, iron-sulfur containing subunit SdhB.
  
 0.970
sdhC
SdhC; Succinate dehydrogenase/fumarate reductase, cytochrome b containing subunit SdhC.
  
 0.970
ACN13217.1
Conserved hypothetical protein (non-secretory protein with 6 TMhelices).
 
     0.947
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
  
 
 0.947
fumA
FumA; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.896
fdx6
Fdx6; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx6.
 
 
 0.881
fdx2
Fdx2; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx2.
 
  
 0.809
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
  
 0.781
ACN13239.1
Putative FAD/NAD(P)-binding:oxidoreductase.
 
     0.778
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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