STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdx1Fdx1; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx1. (71 aa)    
Predicted Functional Partners:
ACN13216.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
 
 
 0.972
soxA2
SoxA2; Sarcosine oxidase, subunit alpha SoxA.
  
 0.956
ACN13217.1
Conserved hypothetical protein (non-secretory protein with 6 TMhelices).
 
     0.938
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
  
 0.935
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
 
 0.935
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
  
 0.925
ACN16274.1
Predicted polyketide synthase.
  
 0.924
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
  
 0.889
ACN13240.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
 
 
 0.882
ACN14599.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
 
 
 0.882
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.