STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mttB2MttB2; Trimethylamine methyltransferase MttB (TMA methyltransferase). (475 aa)    
Predicted Functional Partners:
ACN13246.1
Putative methionine synthase I metH2.
 
     0.828
ACN16953.1
Ferredoxin (4Fe-4S iron-sulfur cluster binding protein).
 
     0.745
fdx7
Fdx7; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx7.
 
     0.695
fdx8
Fdx8; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx8.
 
     0.665
ACN17743.1
Metal-binding protein.
 
     0.648
betT
BetT; High affinity BCCT-family transporter BetT (choline-glycine betaine transporter).
       0.618
ACN16954.1
Hypothetical protein.
  
     0.561
ACN15693.1
Putative hydantoinase/oxoprolinase fusion protein (hydantoin converting enzyme).
  
     0.557
ACN14699.1
Hypothetical protein.
 
   
 0.520
ACN13176.1
Conserved hypothetical protein.
  
   
 0.491
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.