STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAMsrA; Peptide methionine sulfoxide reductase (Methionine-S-sulfoxide reductase). (165 aa)    
Predicted Functional Partners:
ACN17873.1
Conserved hypothetical protein.
   
 0.954
polA
PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.902
ACN17876.1
Conserved hypothetical protein.
   
 
 0.811
msrAB
MsrAB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
0.771
ACN17164.1
Ferredoxin-thioredoxin reductase (glutaredoxin family protein).
 
 
 0.743
ACN14126.1
Glutaredoxin-related protein.
  
 
 0.709
ACN16754.1
Putative flagellar hook-associated protein.
    
   0.592
ACN13268.1
Hypothetical protein.
       0.561
ACN14408.1
Putative lysylphosphatidylglycerol synthetase (LPG synthetase) (Multiple peptide resistance factor).
     
 0.510
ACN13270.1
Predicted permease of the major facilitator superfamily (MFS).
     
 0.509
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.