STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgC1GlgC1; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (407 aa)    
Predicted Functional Partners:
glgA2
GlgA2; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.993
glgA1
GlgA1; Glycogen synthase GlgA (Starch [bacterial glycogen] synthase).
 
 0.991
glgP1
GlgP1; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.972
glpV
GlpV; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.971
glgP2
GlgP2; Alpha-1,4 glucan phosphorylase GlgP.
 
 
 0.967
glgP3
GlgP3; Alpha-1,4 glucan phosphorylase GlgP.
 
 
 0.967
algC
AlgC; Phosphomannomutase/phosphoglucomutase AlgC.
 
 
 0.937
glgC2
GlgC2; Glucose-1-phosphate adenylyltransferase, large subunit GlgC.
  
  
 
0.918
pgm
Pgm; Phosphoglucomutase (Glucose phosphomutase) (PGM).
    
 0.918
gtaB
GtaB; UTP-glucose-1-phosphate uridylyltransferase GtaB.
     
 0.913
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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