STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdx3Fdx3; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx3. (179 aa)    
Predicted Functional Partners:
gltD2
GltD2; Glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT).
  
   0.909
hyfI
HyfI; Hydrogenase HyfI homolog, small subunit.
 
 
 0.905
gltA2
GltA2; NADPH-dependent, homotetrameric glutamate synthase GltA.
  
   0.881
hydA1
HydA1; Fe-only fusion hydrogenase HydA1 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
   
 
 0.867
rnfB-3
Putative NADPH-dependent glutamate synthase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.779
fdhB7
FdhB7; Periplasmic formate dehydrogenase, beta subunit FdhB7 (4Fe-4S family protein).
 
   
 0.777
fdhB8
FdhB8; Periplasmic formate dehydrogenase, beta subunit FdhB8 (4Fe-4S family protein).
 
   
 0.773
fdhB2
FdhB2; Periplasmic formate dehydrogenase, beta subunit FdhB2 (4Fe-4S family protein).
 
   
 0.767
fdhA1
FdhA1; NADH-dependent, cytoplasmic formate dehydrogenase, alpha subunit FdhA1 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.765
ACN13279.1
Sigma-54 dependent transcriptional regulator.
       0.757
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.