STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psdDPsdD; Phosphatidylserine decarboxylase proenzyme PsdD; Belongs to the phosphatidylserine decarboxylase family. (345 aa)    
Predicted Functional Partners:
ACN17597.1
Putative phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 0.963
pldA
PldA; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
  
  
 0.912
ACN17560.1
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
  
  
 
0.901
psd
Psd; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.900
ACN13313.1
Hypothetical protein.
  
    0.811
ACN13314.1
Hypothetical protein.
       0.779
ACN13311.1
Conserved hypothetical protein.
       0.720
gpsA1
GpsA1; Glycerol-3-phosphate dehydrogenase [NAD(P)+].
  
   
 0.563
ACN17002.1
Conserved hypothetical protein.
  
     0.544
ACN16274.1
Predicted polyketide synthase.
  
  
 0.450
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.